The 13 Best MYOB Business Accounting Integrations [2026]

MYOB Business is a powerful accounting tool for Australian and New Zealand businesses, but its true strength is unlocked when connected to other specialized applications. Integrating MYOB with the right software automates workflows, synchronizes data, and creates a single source of truth for your finances. This article provides a detailed list of the best MYOB Business integrations to help you build a more efficient and connected back office.

1. Stripe

Stripe is a global leader in online payment processing, and its integration with MYOB makes it simple to get paid faster. By connecting Stripe, you can add a "Pay Now" button to your MYOB invoices, allowing clients to pay instantly with a credit card or digital wallet. The integration automatically marks invoices as paid and records the transaction fees, which simplifies bank reconciliation and reduces manual data entry.

• Pros:
  • Automates payment collection directly from MYOB invoices.
  • Supports multiple currencies, ideal for businesses with international clients.
  • Provides top-tier security and fraud protection tools.
  • Simplifies reconciliation by automatically recording payments and fees.
• Cons:
  • Transaction fees apply to every payment, which can add up for businesses with high sales volume.
  • Funds can occasionally be held for review, potentially causing temporary cash flow delays.
  • Customer support can sometimes be slow to resolve complex account issues.
• Pricing:
  • Standard transaction fee is 1.75% + A$0.30 for domestic cards.
  • International card fee is 2.9% + A$0.30 per transaction.
  • Custom pricing is available for businesses with large payment volumes. No monthly fees.

Who it's best for: Service-based businesses, e-commerce stores, and anyone who wants to make it easier for clients to pay invoices online.

2. Shopify

For retailers and e-commerce businesses, the Shopify integration for MYOB is an operational game-changer. It connects your online storefront directly to your accounting ledger, synchronizing sales orders, customer information, and inventory levels. This automation eliminates the need to manually enter daily sales data into MYOB, ensures accurate inventory counts across both systems, and simplifies the process of reconciling payouts from your Shopify store.

• Pros:
  • Automatically creates sales invoices in MYOB when an order is placed on Shopify.
  • Keeps stock levels in sync between your e-commerce platform and accounting software.
  • Reduces manual data entry, saving time and minimizing errors.
  • Provides a clear financial picture by linking sales directly to your accounts.
• Cons:
  • Often requires a third-party connector or middleware like Zapier to work, adding another subscription cost.
  • Initial setup can be complex, especially with large product catalogs or customized tax rules.
  • Data syncing for refunds or partial order fulfillments can be tricky to configure.
• Pricing:
  • Shopify plans start around A$39/month for the "Basic" plan.
  • Integration costs depend on the third-party connector app used, which can range from free to over A$50/month.

Who it's best for: Retail businesses using Shopify as their primary online sales channel who need to automate their bookkeeping.

3. Gusto

While MYOB Business has its own robust payroll system, Gusto offers a more comprehensive suite of HR and payroll features. Integrating Gusto allows businesses to manage employee onboarding, benefits administration, and time tracking in one place, while syncing payroll expense data directly to the MYOB general ledger. It automates payslip generation, tax compliance, and superannuation, making it a great all-in-one platform for businesses that have outgrown basic payroll functionality.

• Pros:
  • Offers full-service HR tools, including employee onboarding and benefits administration.
  • User-friendly interface for both administrators and employees.
  • Automates payroll tax filings and compliance requirements.
  • Provides detailed payroll reports that sync with financial accounts in MYOB.
• Cons:
  • Gusto's core focus is the US market; Australian features might not be as mature as local competitors.
  • Can be more expensive than using MYOB's built-in payroll, especially for very small teams.
  • The integration often relies on third-party connectors, which can add a layer of complexity.
• Pricing:
  • Pricing starts at approximately A$40/month base fee plus A$6 per employee per month.
  • Higher-tiered plans offer more advanced HR tools and support at an increased cost.

Who it's best for: Small to medium-sized businesses looking for an integrated payroll and HR platform that syncs back to their MYOB accounts.

4. Expensify

Managing employee expenses can be a major source of administrative work. Expensify simplifies the entire process by allowing employees to scan receipts with their phones, automatically creating expense reports. The integration with MYOB lets you sync these approved expense reports as categorized transactions, complete with receipt images attached. This creates a paperless reimbursement workflow and ensures that all business spending is captured accurately in your books.

• Pros:
  • SmartScan technology automates receipt data entry with high accuracy.
  • Customizable approval workflows to match company policy.
  • Direct sync with MYOB creates bills or journal entries, simplifying reimbursements.
  • Offers corporate cards with built-in expense management controls.
• Cons:
  • The free plan is quite limited, making a paid plan almost necessary for most teams.
  • Pricing is per user, which can become expensive for large organizations.
  • User interface can feel clunky for administrators during setup and configuration.
• Pricing:
  • A limited free plan is available for individuals tracking receipts.
  • Team plans start at approximately A$5 per user per month.

Who it's best for: Businesses with mobile teams that need an efficient way to track and manage employee expense reports and reimbursements.

5. Toggl Track

For consultants, agencies, and any service-based business that bills by the hour, Toggl Track is an essential tool. It provides simple, intuitive time tracking that helps your team log their billable hours against specific projects and clients. When integrated with MYOB, you can use this time data to generate accurate invoices without manual calculations. This ensures you're billing for every minute of work and provides valuable insights into project profitability.

• Pros:
  • Extremely easy to use, with browser extensions and mobile apps for tracking anytime.
  • Detailed reporting helps analyze team productivity and project profitability.
  • Integrates with popular project management tools in addition to MYOB.
  • Ensures accurate and defensible invoices based on logged hours.
• Cons:
  • The most seamless integration with MYOB is often achieved through a middleware tool like Zapier.
  • Lacks more advanced features like employee scheduling or invoicing directly within the app.
  • The free plan does not include key features like setting billable rates.
• Pricing:
  • A free plan is available for up to 5 users with basic functionality.
  • Paid plans start at US$10 per user per month, which unlocks billable hours and other advanced features.

Who it's best for: Professional services firms, freelancers, and agencies that need a straightforward way to track time and create accurate invoices in MYOB.

6. QuickBooks Commerce (formerly TradeGecko)

QuickBooks Commerce is a powerful inventory and order management platform for product-based businesses. Despite the name, it integrates well with other accounting systems like MYOB. It centralizes inventory across multiple sales channels (e.g., Shopify, wholesale) and syncs orders, purchase orders, and stock adjustments with MYOB. This provides a real-time view of inventory levels and financial performance, preventing stockouts and improving operational efficiency for multichannel retailers.

• Pros:
  • Centralizes inventory for B2B and B2C channels.
  • Automates purchase order creation and supplier management.
  • Provides detailed inventory reporting, including sales forecasting and stock valuation.
  • Syncs sales orders directly to MYOB to create invoices.
• Cons:
  • Now part of the Intuit ecosystem, so support priority is naturally for QuickBooks users.
  • Can be expensive for small businesses with simple inventory needs.
  • The user interface is dense and may present a steep learning curve.
• Pricing:
  • Plans start around US$39/month and scale up based on the number of orders and features required.

Who it's best for: Wholesalers, ecommerce merchants, and retailers managing inventory across multiple sales channels.

7. Avalara

While MYOB handles GST for Australian and New Zealand businesses very well, companies selling into multiple international jurisdictions face a much more complex tax landscape. Avalara automates tax compliance by calculating sales tax rates in real-time at the point of transaction. It integrates with your ecommerce or invoicing system and then syncs the tax liabilities into MYOB, ensuring you collect and remit the correct amount of tax for different states, provinces, or countries. It’s a powerful tool for reducing audit risk in complex tax environments.

• Pros:
  • Automatically calculates complex sales tax rates for transactions in thousands of jurisdictions.
  • Manages tax exemption certificates for compliant tax-free sales.
  • Helps prepare and file tax returns in multiple regions.
  • Reduces audit risk by maintaining a complete record of tax calculations.
• Cons:
  • Primarily designed for US sales tax and may be overly complex for businesses only dealing with Australian GST.
  • Pricing is based on transaction volume, which can be costly for startups or low-margin businesses.
  • Implementation can be technically complex and time-consuming.
• Pricing:
  • Pricing is quote-based, depending on transaction volume and the number of jurisdictions.

Who it's best for: Businesses selling products or services in regions with complex or multi-jurisdictional sales tax obligations, especially those expanding into the US market.

8. HubSpot CRM

Connecting your sales and accounting data provides a complete 360-degree view of your customer relationships. The HubSpot integration lets you sync customer data, quotes, and deals between your CRM and MYOB. When a deal is closed in HubSpot, an invoice can be created automatically in MYOB. This unites your sales and finance teams, improves cash flow by accelerating the invoicing process, and ensures both systems contain accurate, up-to-date customer information.

• Pros:
  • Keeps contact and company information consistent across sales and accounting.
  • Automates the handoff from "deal won" in the CRM to "invoice sent" in MYOB.
  • Gives your sales team visibility into a customer's payment status.
  • Provides a single source of truth for customer revenue data.
• Cons:
  • Requires a third-party connector app, as there is no direct native integration from HubSpot to MYOB.
  • Data mapping between the two systems can be tricky to configure correctly.
  • Advanced features may require a paid HubSpot subscription, which can be expensive.
• Pricing:
  • HubSpot offers a powerful free CRM. Paid plans (Sales Hub, Marketing Hub) are required for automation features.
  • Integration middleware subscriptions typically add to the overall cost.

Who it's best for: Sales-driven organizations that want to bridge the gap between their sales pipeline in HubSpot and their financial records in MYOB.

9. Xero

Integrating MYOB with Xero is an unusual but sometimes necessary step, primarily for accounting firms that serve clients on both platforms. It can also be useful for businesses in the middle of a migration from one system to another. Specialized data migration tools can be used to sync transactions, a chart of accounts, and contacts between MYOB and Xero. This allows for consolidated reporting or a phased transition without losing historical financial data.

• Pros:
  • Enables accountants to manage clients across different accounting platforms.
  • Facilitates a smoother, more controlled migration from MYOB to Xero (or vice versa).
  • Allows for temporary data synchronization during mergers or acquisitions.
• Cons:
  • There is no simple, ongoing sync; this is typically done for migration projects using third-party services.
  • High risk of data duplication or errors if not managed carefully by an expert.
  • Not a practical solution for daily operational workflows. It’s a specialized, one-off tool.
• Pricing:
  • The cost is based on services offered by data migration specialists and can vary significantly. Xero’s own monthly subscription fees apply.

Who it's best for: Accounting practices or businesses managing a complex migration between platforms or who have a short-term need to operate both systems in parallel.

10. PayPal

Much like Stripe, PayPal is a popular payment gateway that can be integrated with MYOB to streamline receiving payments. Connecting PayPal enables customers to pay invoices directly via their PayPal account or with a credit card. An integration automates the process by importing payment data, properly accounting for PayPal’s transaction fees, and helps reconcile your PayPal account balance with your accounting records in MYOB, saving time on administrative tasks.

• Pros:
  • PayPal is a widely recognized and trusted payment option for customers worldwide.
  • Simple to set up and add as a payment option to MYOB invoices.
  • Automates the entry of sales receipts and transaction fees.
  • Provides robust buyer and seller protection policies.
• Cons:
  • Per-transaction fees can be higher than other payment gateways, especially for smaller amounts.
  • Disputes and account freezes can temporarily lock access to funds.
  • Checkout experience offers less branding customization compared to solutions like Stripe.
• Pricing:
  • Fees are transaction-based, typically around 2.6% + A$0.30 for domestic transactions.
  • No monthly fees for a standard business account.

Who it's best for: Small businesses and online sellers looking for a simple, trusted payment solution that integrates easily with their invoicing process.

11. Deputy

Deputy is a leading employee scheduling, time tracking, and workforce management tool. For businesses with shift-based workforces like retail, hospitality, or healthcare, it provides immense value. Deputy integrates with MYOB's payroll by exporting approved timesheets electronically. This eliminates manual data entry, reduces payroll errors, helps ensure compliance with labor laws regarding breaks and overtime, and gives you a clear picture of labor costs against budgets.

• Pros:
  • Simplifies employee scheduling and allows staff to easily swap shifts.
  • Captures accurate work hours through mobile apps or on-site time clocks.
  • Streamlines the payroll process by exporting approved timesheets directly to MYOB.
  • Helps manage leave balances and employee availability.
• Cons:
  • The monthly per-employee pricing model can add a significant cost for businesses with large teams.
  • The initial setup of award rates and complex work rules can be time-consuming.
  • Some users find the mobile app interface less intuitive than the desktop version.
• Pricing:
  • Plans for scheduling and time attendance start at approximately A$4.50 per user per month.

Who it's best for: Businesses with hourly or shift-based employees, such as hospitality, retail, and healthcare, who need efficient scheduling and timesheet management.

12. WooCommerce

WooCommerce is the most popular e-commerce plugin for websites built on WordPress, allowing businesses to create highly customizable online stores. Similar to the Shopify integration, connecting WooCommerce to MYOB automates the flow of sales data from your website to your accounting system. Each online sale can trigger the creation of an invoice in MYOB, update customer records, and adjust inventory levels, ensuring that your financials accurately reflect your online business activity.

• Pros:
  • WooCommerce is open-source and free, offering great flexibility.
  • Gives you full control over the look and feel of your online store.
  • A direct integration automates order and product syncing with MYOB.
  • Syncs customer data to provide a unified business-wide contact list.
• Cons:
  • Requires an existing WordPress website and some technical skill to manage.
  • The quality of the MYOB integration depends heavily on the specific third-party plugin used.
  • You are responsible for site security, hosting, and performance.
• Pricing:
  • The WooCommerce plugin itself is free.
  • Costs arise from web hosting, premium themes/plugins, and payment gateway fees. Integration plugins may also have a cost.

Who it's best for: Businesses that use a WordPress site for their e-commerce store and want a direct, automated link to their accounting software.

13. Workato

Workato is an enterprise-grade integration and automation platform that can connect MYOB to almost any cloud application imaginable. It goes beyond simple one-to-one connections, allowing you to build complex, multi-step workflows across your entire organization. For example, a new sales order in a custom CRM could trigger an invoice in MYOB, a task in a project management tool, and a message in a team chat app—all automatically. Workato is the solution when basic integrations or tools like Zapier aren’t powerful enough to meet your needs.

• Pros:
  • Connects to thousands of applications, enabling nearly limitless automation.
  • Allows for conditional logic and sophisticated custom workflows.
  • Provides real-time data sync for mission-critical operations.
  • Designed for reliability and scalability in enterprise environments.
• Cons:
  • Comes with a steep learning curve and usually requires technical expertise.
  • Pricing is enterprise-focused and significantly more expensive than simpler tools.
  • Overkill for most small businesses with straightforward integration needs.
• Pricing:
  • Pricing is custom and based on the complexity and volume of the workflows ("recipes") you build. It is targeted at mid-market and enterprise companies.

Who it's best for: Larger businesses with unique, complex automation needs and the technical resources to build and manage sophisticated integration recipes on an advanced platform.

Final Thoughts

Choosing the right integrations can transform MYOB Business from a standalone accounting program into the financial core of your entire business operation. The ideal set of tools will depend on your industry and specific needs, from seamless payment processing and e-commerce sync to automated expense tracking and sophisticated workforce management.

As your operations become more connected and potentially more complex with these integrations, clear and accurate tax guidance is essential. Instead of searching through forums for answers about the tax implications of online sales or multi-state employee expenses, you need a definitive source. That’s why we built Feather AI. We give you instant, precise answers to your toughest tax questions with citations directly from authoritative sources like the IRS and state tax codes, helping you grow your business with confidence.